yngC [2017-05-17 12:14:15]

similar to alkaline phosphatase

locus: BSU18190

pI: 9.77

mw: 21.78 kDa

protein length: 198 aa

gene length: 594 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
• [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

Gene

Coordinates: 1,947,668 → 1,948,264

The protein

Protein family

• dedA family (according to Swiss-Prot)

Paralogous protein(s)

• [protein|B2C089DCE51CA0CB11947FCD6F4EFAFF66269829|YbfM], [protein|392921E3C53846236DF75D7585697969B11AF2F3|YlmB] (31%)

[SW|Localization]

• cell membrane (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|CBCBF948979D9D63CBA86A9ED865E43B1F85A0AD|yngA]-[gene|69C5D9EF7ED43BCAB7A9D6148EDD323CE72F8E3D|yngB]-[gene|289828D37CF5422908316ED2EF1AEAE76F84161D|yngC]
  description: [Pubmed|20512483]

  sigma factors

  • [protein|081DF3EE9FA56209D648C7677188C61CE3AA8E41|SigM]: sigma factor, [Pubmed|18179421], in [regulon|081DF3EE9FA56209D648C7677188C61CE3AA8E41|SigM regulon]

  regulatory mechanism

  • [protein|706983E6942E883D3A9D45693E7B4015AEABE60B|YclJ]: activation, [Pubmed|20512483], in [regulon|706983E6942E883D3A9D45693E7B4015AEABE60B|YclJ regulon]

  regulation

  • expression during spore [SW|germination] is strongly reduced under conditions of osmotic stress [Pubmed|27766092]

• genes: [gene|289828D37CF5422908316ED2EF1AEAE76F84161D|yngC]
  description: [Pubmed|18179421]

Biological materials

Mutant

• MGNA-B397 (yngC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1396 NBRP B. subtilis, Japan]

References

• 20512483,18179421